PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512545.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 327aa    MW: 36751.7 Da    PI: 4.8001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.86.9e-12161204654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_004512545.1 161 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 204
                     589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491155204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-15158224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-9161204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.16E-5162208No hitNo description
Gene3DG3DSA:4.10.280.108.9E-16162225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048734.27E-4253294No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MELSQLGFLD ELLAPRKDTW NALSTTGLNE LLLPTCCYTF DSFDENLLNN PSLNPSFASF  60
STPLDHRFEC SYGTDATTPS YPFVDAFTVP EFDESAPLLP SMEDEAFGGF LGTESNKSFE  120
QTKINCKVEE HVNEIPVFNM GLCGEKKQKS KRVEGQPSKN LMAERRRRKR LNDRLSMLRS  180
IVPKISKMDR TSILGDTIDY MKELLERIGK LQEEVEDGTN QINLLGISKE LKPNEVMVRN  240
SPKFDVERRD QDTRISICCA TKPGLLLSTV NTLEALGLEI HQCVISSFND FSLQASCSEA  300
AGQRNCMNPE EIKQSLFRNA GYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163170ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944231e-177BT094423.1 Soybean clone JCVI-FLGm-18L15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004512545.10.0PREDICTED: transcription factor bHLH93-like isoform X1
SwissprotQ9LSL12e-86BH093_ARATH; Transcription factor bHLH93
TrEMBLA9YWR20.0A9YWR2_MEDTR; BHLH transcription factor
STRINGGLYMA01G02390.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-87beta HLH protein 93